Syllabus
Natural History of Vertebrates Lecture (ZO 556)
Spring 2008

instructor: Dwight Moore, Ph.D.
office - Science Hall 144
phone - 620-341-5611
email - dmoore@emporia.edu    (put "vertebrates" in the subject line)
http://www.emporia.edu/biosci/moorbiol.htm
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office hours:    Tuesday 9:00 - 11:00, Wednesday 1:00 - 2:00, Thursday 9:00 - 11:00, and by appointment. In addition, I am usually on campus by 7:30 am and do not leave until after 5:30 pm.    my schedule
text:Pough, F. H., C. M. Janis, and J. B. Heiser. 2004. Vertebrate Life. 7th edition. Macmillan Publ. Co., New York.(required)

Wilson, E. O. 1994. Naturalist. Warner Books, New York. (required)

Day, R. A. 1992. Scientific English: A Guide for Scientists and other Professionals. Oryx Press. (recommended)
section: ZO 556, MWF 8:00 - 8:50, Science Hall 46
I. course description:

Natural History of Vertebrates is a course designed for biology majors. The objective of the course is to provide an in-depth study of the vertebrates. Topics will include the origin and evolution of vertebrates, and their ecology, behavior and specializations. The lecture will also introduce the theories concerning the evolution of the vertebrates and the evidence that supports those theories.
Even though the lecture course (ZO 556) is a separate course from lab (ZO 557), both courses support each other. You can not take one course without the other, that is you must be concurrently enrolled in both courses. IF YOU FAIL EITHER COURSE, YOU MUST REPEAT BOTH COURSES.

II. pre-requisites:

You must have completed biology of animals and lab (ZO 214/215) and ecology (EB 480) or their equivalents. These course will give you a basic understanding of animals and their evolution and organization and the basics for understanding the ecology of the vertebrates. Natural History of Vertebrates will then build on this information.

III. course organization:

Material will be presented primarily in the form of lectures and reading assignments from the text. Lecture will cover the points to be learned and will direct your study from the text. You can not expect to pass Natural History of Vertebrates without intensive study outside of lecture (2 hours of study for every hour in class). The material presented in the latter part of the course will be based on material presented in the first part of the course, therefore you will have to commit the material to long term memory. In addition, the final exam is comprehensive.

I have placed notes from the lecture on a web site. I am assuming that you will read these notes each day before coming to class. In addition, there will be material for which your are responsible that may only be presented in these notes on the web site. Do not ignore these notes; they are not optional material.

IV. grading:

Your grade will be determined based upon the total points earned on examinations, a term paper, homework assignments from the biography, and daily summaries of your notes. There is no provision for doing extra or outside work to improve your grade.

A  = 92.0% to 100%
A-  = 89.0% to 91.9%
B+  = 86.0% to 88.9%
B  = 83.0% to 85.9%
B-  = 79.0% to 82.9%
C+  = 76.0% to 78.9%
C  = 70.0% to 75.9%
D  = 60.0% to 69.9%
F < 60.0%

examinations: Three tests plus a final exam are scheduled for the semester (see class schedule). The final exam is comprehensive. Each test is worth 100 points. The final exam is worth 200 points, 100 points over material since the last test and 100 points over material from the previous three tests. This yields 500 possible points on the exams. If you have to miss an exam for whatever reason, I would appreciate it if you would make arrangements before hand to take the exam. If you have several other tests scheduled for the day of an exam or some other catastrophe befalls you, you may postpone the test a day or two. IF, BEFORE YOU TAKE THE EXAM, YOU DISCUSS THE EXAM WITH ANY CLASSMATE(S) FOR ANY REASON, EVEN TO ASK HOW LONG THE TEST IS, YOU AND THE CLASSMATE(S) WITH WHOM YOU TALKED WILL RECEIVE AN AUTOMATIC "F"; NO QUESTIONS ASKED!!! The make up exam may not be the same test as that taken by the rest of the class.

term paper: The paper is worth about 20% of your grade (140 points). The term paper must be a review article about some aspect (for example; evolution, behavior, foraging ecology, reproduction, energetics) of a taxon of vertebrates (order, family, genus, or species). Your paper should be an in-depth summary and discussion about your topic. This assignment is in three parts.

First, a literature search plus a 2-page summary of two of the articles from the primary literature is due at the beginning of class on 27 February 2008 (late penalty points apply, see below). You must include 1) evidence of having done an online computer search for citations in one of the databases in FirstSearch (print-out from the computer), 2) a complete copy of the two articles, and 3) your summary of the two articles. This summary must be at least 2.0 full pages exclusive of the literature cited, but not more than 3.0. The summary must be typed in exactly the style of the term paper that is due later in the semester and statements that you make in the summary must be supported with appropriate citations that are then listed in the "literature cited" section at the end of the paper. The two articles must address the same topic and your summary must indicate the relationships between the two papers. For example, one paper builds on the work of a previous paper, or the two papers present opposite views of the same topic, or the two papers reach the same conclusions but use different methods. The summary should include why the authors performed the research, how they did the research, what they found, and a discussion of the results. Also, include a paragraph discussing why you chose your particular topic. This summary is worth 20 points. The summary will be graded based upon its grammatical correctness and upon your ability to summarize the findings. Be sure to read the "Instructions for Review Papers in Natural History of Vertebrates" and pay particular attention to the sections on citing literature and plagiarism.

The second part is an annotated bibliography, which is worth 20 points and is due on 4 April 2008. The purpose of the annotated bibliography is to ensure that you have completed a large part of your literature search a few weeks before the paper is due, that you have at least skimmed the sources for information, and that you have a pool of sources from which you can choose the ones that address the topic of your paper. The bibliography must contain a minimum of 20 entries, at least half of which are from the primary literature. Each entry must contain 1) the citation in exactly the format specified in the "Instructions for Review Papers in Natural History of Vertebrates", 2) a statement as to wether the citation is from the primary literature or not, and 3) three or four sentences that briefly describe the content of the paper that is relevant to your topic. The citations must be in alphabetical order just as they would be in the literature cited section of your paper. The title of your bibliography must be a working title for your paper.

The third part is the paper itself, which is worth 100 points. There is no upper limit to the number of citations that would be appropriate. You should use as many as is possible concerning your topic, however, minimally the literature cited section must contain at least 12 citations, with at least 9 of these from the primary scientific literature. Your paper should be typed and double-spaced and at least 10.0 pages of text, exclusive of the literature cited, and with margins that are less than or equal to one inch on all sides on every page. Papers that do not meet these very minimum requirements can expect a grade no higher than 70 out of 100 points (a "low C"). For additional information and directions see the "Instructions for Review Papers in Natural History of Vertebrates". PAPERS THAT DO NOT MEET THESE VERY MINIMAL REQUIREMENTS CAN EXPECT A GRADE NO HIGHER THAN 70 OUT OF 100 POINTS (A "low C"). The format of your paper must follow exactly the style given in the "Instructions for Review Papers in Natural History of Vertebrates". Your paper will be graded on its scientific content and the coverage of the topic, in addition, the paper will be graded on grammar, clarity, and freedom from typographical and spelling errors. Papers are due at the beginning of class on 5 May 2005. A 5-point penalty will be assessed for every day that the paper is late, and of course, days during holidays and weekends count as days late. Plagiarizing your paper from some other source or collaborative efforts with other students will be considered cheating and will result in a grade of zero for your efforts. Be sure to carefully read the section on plagiarizing and quoting from other sources in "Instructions for Review Papers in Natural History of Vertebrates". In addition, if you turn-in essentially this same paper for a different class, I will consider it cheating and give you a zero on the paper. Be sure to review the Policies on Academic Dishonesty of Emporia State University and the Department of Biological Sciences.

biography The reason that I have required a biography is so that you can begin to develop an understanding of who scientists are and how they came to be scientists. This biography will introduce you to one of the major scientists of recent times. In addition to learning about the person about whom the book is written, you will also see how the work of one scientist fits with the work of other scientists. I hope that you will find the book interesting of itself, however, there will be several homework assignments associated with the book and these will not be accepted late. You must do the answers on your own; this is not a collaborative project. If you have to miss class for whatever reason, you can e-mail the answers to me by 5:00 PM on the due date and I will still accept them. The text of your answers must be embedded in the e-mail message. Do NOT send your answers as an attachment.

V. attendance:

I will sometimes take attendance, even though I will not count lack of attendance against you. However, if you do not come to class, you will be unable to check if your understanding of the material is adequate. You should be committed enough to your education to come to class, otherwise you are just wasting your money.

VI. academic dishonesty:

Plagiarism, which was mentioned above and is described in more detail in the "Instructions for Review Papers in Natural History of Vertebrates" will result in a zero on your term paper. In addition, any student who permits another student to use his/her work will get a zero on the assignment. Finally, any copying or other forms of cheating during a test will result in a zero on that exam. The Chair of the Department of Biological Sciences will be informed of all acts of academic dishonesty and the action taken against the offender. Be sure to review the Policies on Academic Dishonesty of Emporia State University and the Department of Biological Sciences.

VII. accomodations for disabilities:

Emporia State University will make reasonable accommodations for persons with documented disabilities. Students need to contact the Director of Disability Services (lower level of the Memorial Union, 341-6637) and the professor as early in the semester as possible to ensure that classroom and academic accommodations are implemented in a timely fashion. All communication between students, the Office of Disability Services, and the professor will be strictly confidential.

VIII. home page:

There is a home page for this course on ESU's World Wide Web server. In addition, to the notes and the syllabus, there will be other information on the server that will be useful to you during the course. I would strongly encourage you to take advantage of this information during the course. The URL for the home page is http://academic.emporia.edu/mooredwi/nathist/.

IX. important and useful information from the registrar.


TENTATIVE CLASS SCHEDULE
NATURAL HISTORY OF VERTEBRATES
LECTURE (ZO 556)

Indicates official school holidays
There are a couple of days that I will gone from lecture. You are still responsible for studying this material and asking questions if you do not understand. There is a good chance that I will not lecture over this material.
Days that papers are due or that tests will occur.

16 Jan introduction, cladistics
18 JanElectronic Resources
organ systems
21 Jan no class, Martin Luther King Day
23 Jan classification and origin of vertebrates
25 Jan organ systems; fossils, continental drift
28 Jan fossils, continental drift; historical biogeography
30 Jan earliest vertbrates, agnathans
1 Febfield trip to Ross Reservation
4 Feb hagfishes and lampreys, chondrichtyes
6 Feb chondrichthyes
8 Feb chondrichthyes, osteichthyes
11 Feb osteichthyes
13 Feb exam I
15 Feb specializations for life in the water
18 Feb specializations for life in the water
20 Feb lobe-finned fish
22 Feb no class, Whatever Day
25 Feb radiation and origin of the tetrapods
27 Feb radiation and origin of the tetrapods
summary for term paper due
29 Feb amphibians
3 Mar amphibians
5 Mar amphibian specializations
7 Mar amphibian specializations
10 Mar amniotes
12 Mar amniotes
14 Mar turtles
17 Mar no class, Spring Break
19 Mar no class, Spring Break
21 Mar no class, Spring Break
24 Mar turtles
26 Mardiapsids, dinosaurs
28 Mar exam II
31 Mardinosaurs
2 Apr mass extinctions
last day for automatic "W" on transcript
4 Apr lizards and snakes
annotated bibliography due
7 Apr specializations of lizards and snakes
9 Apr specializations of lizards and snakes
11 Apr birds
14 Apr origin of birds and flight
16 Apr specializations of birds
18 Apr exam III
21 Apr specializations of birds
23 Apr synapsids
25 Apr origin of mammals
28 Apr evolution of mammals
30 Apr endothermy versus ectothermy
2 May water balance
5 May specializations of mammals
term paper due
7 May specializations of mammals
9 May evolution of humans
12 May final exam Monday, 10:10,
(100 points from the first three exams plus 100 points from new material).
Last updated on 11 January 2008.
Provide comments to Dwight Moore at mooredwi@emporia.edu.
Return to the Natural History of Vertebrates Home Page at Emporia State University.